Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 AL603756.1-201ENST00000606511 2163 ntBASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 AC004870.1-201ENST00000315132 882 ntBASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 DUX4L17-201ENST00000557360 1267 ntBASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 RN7SL510P-201ENST00000581311 263 ntBASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UPF3BQ9BZI7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
UPF3BQ9BZI7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 KRT16P4-201ENST00000453883 522 ntBASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UPF3BQ9BZI7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UPF3BQ9BZI7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms