Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
BRIP1Q9BX63 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.89■□□□□ 0.94
BRIP1Q9BX63 AC012317.2-201ENST00000623305 2251 ntBASIC20.89■□□□□ 0.94
BRIP1Q9BX63 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRIP1Q9BX63 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
BRIP1Q9BX63 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 ARSEP1-201ENST00000420443 635 ntBASIC20.88■□□□□ 0.93
BRIP1Q9BX63 KRT17P7-201ENST00000451704 1104 ntBASIC20.88■□□□□ 0.93
BRIP1Q9BX63 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 TP53TG3HP-202ENST00000569755 579 ntBASIC20.88■□□□□ 0.93
BRIP1Q9BX63 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
BRIP1Q9BX63 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 AC021097.1-201ENST00000607902 574 ntBASIC20.87■□□□□ 0.93
BRIP1Q9BX63 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
BRIP1Q9BX63 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 EGFEM1P-202ENST00000431685 1563 ntBASIC20.86■□□□□ 0.93
BRIP1Q9BX63 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 ATP5G2P4-201ENST00000442175 420 ntBASIC20.86■□□□□ 0.93
BRIP1Q9BX63 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRIP1Q9BX63 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms