Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCGF1Q9BSM1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SIGLEC16-201ENST00000599858 1437 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 LAGE3P1-201ENST00000425356 484 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SIGLEC30P-201ENST00000455569 941 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SLC25A1P1-201ENST00000528351 927 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 AC107918.4-202ENST00000641623 219 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 REXO1L11P-201ENST00000620964 1927 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 UBALD1-205ENST00000590891 2641 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 PCDH8P1-201ENST00000428983 2773 ntBASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCGF1Q9BSM1 AC148477.5-201ENST00000625164 1645 ntBASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PCGF1Q9BSM1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 MYCLP1-201ENST00000372451 1075 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 RPL13AP23-201ENST00000480739 586 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC105339.3-201ENST00000560043 636 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC012640.2-201ENST00000561606 901 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 MIR1199-201ENST00000621445 119 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC008735.5-201ENST00000623544 497 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 AC073592.4-201ENST00000623827 446 ntBASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCGF1Q9BSM1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms