Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AC073592.5-201ENST00000624854 528 ntBASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AL162727.3-201ENST00000635661 2787 ntBASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 ALOX12P2-203ENST00000570921 1945 ntBASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 DUX4L26-201ENST00000489078 1255 ntBASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 KRT8P26-201ENST00000534154 1276 ntBASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 RN7SL850P-201ENST00000579959 291 ntBASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.4□□□□□ -0.1
HDHD3Q9BSH5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HDHD3Q9BSH5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 CYP2T1P-202ENST00000641596 2535 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms