Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 LINC00895-201ENST00000629028 1637 ntBASIC17.03■□□□□ 0.32
CPNE1Q99829 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE1Q99829 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE1Q99829 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE1Q99829 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CPNE1Q99829 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CPNE1Q99829 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
CPNE1Q99829 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.02■□□□□ 0.32
CPNE1Q99829 AC012615.1-201ENST00000565797 1299 ntBASIC17.02■□□□□ 0.32
CPNE1Q99829 AC087388.1-201ENST00000571370 1112 ntBASIC17.02■□□□□ 0.32
CPNE1Q99829 MIR3180-1-201ENST00000580374 94 ntBASIC17.02■□□□□ 0.32
CPNE1Q99829 MIR3180-3-201ENST00000584616 94 ntBASIC17.02■□□□□ 0.32
CPNE1Q99829 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE1Q99829 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE1Q99829 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE1Q99829 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CPNE1Q99829 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE1Q99829 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CPNE1Q99829 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE1Q99829 AC079776.2-201ENST00000641154 1609 ntBASIC17.02■□□□□ 0.31
CPNE1Q99829 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE1Q99829 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE1Q99829 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPNE1Q99829 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
CPNE1Q99829 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CPNE1Q99829 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CPNE1Q99829 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 AC026691.1-201ENST00000602502 2017 ntBASIC17.01■□□□□ 0.31
CPNE1Q99829 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CPNE1Q99829 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CPNE1Q99829 HLA-J-202ENST00000469281 1241 ntBASIC17.01■□□□□ 0.31
CPNE1Q99829 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.01■□□□□ 0.31
CPNE1Q99829 AP000867.3-201ENST00000524675 377 ntBASIC17.01■□□□□ 0.31
CPNE1Q99829 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.01■□□□□ 0.31
CPNE1Q99829 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPNE1Q99829 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CPNE1Q99829 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPNE1Q99829 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms