Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS2Q99743 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NPAS2Q99743 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS2Q99743 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NPAS2Q99743 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 TSPY12P-201ENST00000421279 868 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
NPAS2Q99743 AC091304.2-201ENST00000564639 760 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 AC011840.4-201ENST00000578471 627 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 AL121772.3-201ENST00000610840 674 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.71■□□□□ 0.27
NPAS2Q99743 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 AC009154.2-201ENST00000621177 724 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.71■□□□□ 0.27
NPAS2Q99743 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NPAS2Q99743 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS2Q99743 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS2Q99743 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS2Q99743 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.71■□□□□ 0.27
NPAS2Q99743 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS2Q99743 AC132872.4-202ENST00000622924 2756 ntBASIC16.71■□□□□ 0.26
NPAS2Q99743 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.71■□□□□ 0.26
NPAS2Q99743 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
NPAS2Q99743 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS2Q99743 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS2Q99743 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.71■□□□□ 0.26
NPAS2Q99743 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NPAS2Q99743 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPAS2Q99743 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.7■□□□□ 0.26
NPAS2Q99743 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPAS2Q99743 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.7■□□□□ 0.26
NPAS2Q99743 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
NPAS2Q99743 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 FER1L4-210ENST00000615531 5998 ntBASIC16.7■□□□□ 0.26
NPAS2Q99743 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
NPAS2Q99743 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPAS2Q99743 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
NPAS2Q99743 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms