Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 IGHV3-52-201ENST00000519770 353 ntBASIC11.33□□□□□ -0.6
LITAFQ99732 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.33□□□□□ -0.6
LITAFQ99732 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.33□□□□□ -0.6
LITAFQ99732 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.33□□□□□ -0.6
LITAFQ99732 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.33□□□□□ -0.6
LITAFQ99732 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 FER1L4-210ENST00000615531 5998 ntBASIC11.33□□□□□ -0.6
LITAFQ99732 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.33□□□□□ -0.6
LITAFQ99732 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 AC010460.3-201ENST00000511359 1579 ntBASIC11.33□□□□□ -0.6
LITAFQ99732 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LITAFQ99732 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LITAFQ99732 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 AC002310.6-201ENST00000624451 1377 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.32□□□□□ -0.6
LITAFQ99732 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 SAPCD2P4-201ENST00000424595 1171 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC11.32□□□□□ -0.6
LITAFQ99732 RARRES2P6-201ENST00000567333 442 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 AC142086.2-201ENST00000569753 217 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 AC109462.3-201ENST00000573934 613 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 AP005242.2-201ENST00000580065 1175 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.32□□□□□ -0.6
LITAFQ99732 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 AC092865.7-201ENST00000641832 219 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 AC112504.1-201ENST00000623415 1841 ntBASIC11.32□□□□□ -0.6
LITAFQ99732 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LITAFQ99732 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.32□□□□□ -0.6
LITAFQ99732 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LITAFQ99732 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms