Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC087641.1-201ENST00000557561 1021 ntBASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP1Q96SZ6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 AC140658.5-201ENST00000438532 169 ntBASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 MPDU1-223ENST00000582151 728 ntBASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP1Q96SZ6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 AC211486.1-202ENST00000416371 468 ntBASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 AC004967.1-201ENST00000453589 447 ntBASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 AC211476.1-201ENST00000503899 468 ntBASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDK5RAP1Q96SZ6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AC141586.5-201ENST00000624546 2050 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 ELL2P1-201ENST00000413990 1906 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 FAM58CP-201ENST00000435741 640 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AP002472.1-201ENST00000577490 586 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AL078644.1-201ENST00000609881 752 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 AC091812.2-201ENST00000619081 385 ntBASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDK5RAP1Q96SZ6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms