Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 AC020916.1-201ENST00000587762 1774 ntBASIC16.51■□□□□ 0.23
LINC00615Q96LM1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00615Q96LM1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 AC005915.1-201ENST00000624912 2018 ntBASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 AC023274.1-201ENST00000418278 595 ntBASIC16.5■□□□□ 0.23
LINC00615Q96LM1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.5■□□□□ 0.23
LINC00615Q96LM1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00615Q96LM1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 AC140658.5-201ENST00000438532 169 ntBASIC16.49■□□□□ 0.23
LINC00615Q96LM1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 MTDHP5-201ENST00000598980 586 ntBASIC16.49■□□□□ 0.23
LINC00615Q96LM1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00615Q96LM1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms