Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHAMP1Q96JM3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.77■□□□□ 0.75
CHAMP1Q96JM3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.77■□□□□ 0.75
CHAMP1Q96JM3 HCG11-201ENST00000411553 5696 ntBASIC19.77■□□□□ 0.75
CHAMP1Q96JM3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHAMP1Q96JM3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AL513523.2-202ENST00000427283 2040 ntBASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AD001527.2-201ENST00000622994 785 ntBASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
CHAMP1Q96JM3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 NUS1P1-201ENST00000446295 882 ntBASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 AC011840.4-201ENST00000578471 627 ntBASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 AC105917.1-201ENST00000506637 2539 ntBASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 AC144831.1-201ENST00000573312 2656 ntBASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 DBET-201ENST00000630918 3363 ntBASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHAMP1Q96JM3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 AC103564.2-201ENST00000432853 1299 ntBASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHAMP1Q96JM3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms