Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 TSPY14P-201ENST00000303979 915 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 AC002558.1-201ENST00000488906 803 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 AL391256.1-201ENST00000443260 1855 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AC010653.2-201ENST00000623505 997 ntBASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 LINC02228-204ENST00000642115 2962 ntBASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP6Q96FZ7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 INGX-201ENST00000359239 846 ntBASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 ECEL1P2-202ENST00000465689 757 ntBASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 AC010947.1-201ENST00000623454 693 ntBASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP6Q96FZ7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms