Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE4Q96A23 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE4Q96A23 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE4Q96A23 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE4Q96A23 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 CRYGEP-201ENST00000412192 528 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 PMS2P1-201ENST00000431037 1228 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC087163.2-201ENST00000457299 853 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC124947.2-201ENST00000547118 1133 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC004790.2-201ENST00000623588 572 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 AC009053.2-201ENST00000563701 2365 ntBASIC15.29■□□□□ 0.04
CPNE4Q96A23 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE4Q96A23 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE4Q96A23 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.28■□□□□ 0.04
CPNE4Q96A23 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 KRT18P58-201ENST00000527480 1120 ntBASIC15.28■□□□□ 0.04
CPNE4Q96A23 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 AC027601.4-201ENST00000611259 610 ntBASIC15.28■□□□□ 0.04
CPNE4Q96A23 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE4Q96A23 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE4Q96A23 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE4Q96A23 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE4Q96A23 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms