Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC4Q92889 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC4Q92889 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC4Q92889 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ERCC4Q92889 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ERCC4Q92889 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC4Q92889 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERCC4Q92889 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ERCC4Q92889 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 AL645728.1-201ENST00000366221 2101 ntBASIC19.34■□□□□ 0.69
ERCC4Q92889 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 AC148477.5-201ENST00000625164 1645 ntBASIC19.34■□□□□ 0.69
ERCC4Q92889 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ERCC4Q92889 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 AC124947.2-201ENST00000547118 1133 ntBASIC19.34■□□□□ 0.69
ERCC4Q92889 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 AC010331.1-201ENST00000611423 582 ntBASIC19.34■□□□□ 0.69
ERCC4Q92889 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERCC4Q92889 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ERCC4Q92889 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ERCC4Q92889 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.33■□□□□ 0.69
ERCC4Q92889 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
ERCC4Q92889 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ERCC4Q92889 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
ERCC4Q92889 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
ERCC4Q92889 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ERCC4Q92889 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ERCC4Q92889 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
ERCC4Q92889 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 FAM86EP-206ENST00000510506 987 ntBASIC19.33■□□□□ 0.68
ERCC4Q92889 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ERCC4Q92889 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 AD001527.2-201ENST00000622994 785 ntBASIC19.33■□□□□ 0.68
ERCC4Q92889 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.33■□□□□ 0.68
ERCC4Q92889 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ERCC4Q92889 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 TP73-AS1-210ENST00000637775 1455 ntBASIC19.33■□□□□ 0.68
ERCC4Q92889 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.33■□□□□ 0.68
ERCC4Q92889 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.33■□□□□ 0.68
ERCC4Q92889 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ERCC4Q92889 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ERCC4Q92889 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC4Q92889 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC4Q92889 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ERCC4Q92889 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC4Q92889 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms