Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC100757.3-201ENST00000622361 1406 ntBASIC26.11■■□□□ 1.77
CASKIN1Q8WXD9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CASKIN1Q8WXD9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 TSPY16P-201ENST00000449843 468 ntBASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC26.09■■□□□ 1.77
CASKIN1Q8WXD9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 COPE-202ENST00000349893 948 ntTSL 2 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 AC008761.3-201ENST00000624803 892 ntBASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 AL139011.1-202ENST00000642063 584 ntBASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC26.08■■□□□ 1.77
CASKIN1Q8WXD9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CASKIN1Q8WXD9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CASKIN1Q8WXD9 KRT8P39-201ENST00000396270 1433 ntBASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 AL138828.2-201ENST00000615812 383 ntBASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 AC092068.3-201ENST00000587894 2016 ntBASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CASKIN1Q8WXD9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 AC241585.1-201ENST00000433527 519 ntBASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 PCDHB17P-201ENST00000539533 2393 ntBASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CASKIN1Q8WXD9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CASKIN1Q8WXD9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC26.05■■□□□ 1.76
CASKIN1Q8WXD9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC26.05■■□□□ 1.76
CASKIN1Q8WXD9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms