Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.82■□□□□ 0.92
RTL9Q8NET4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 SPDYE14P-201ENST00000442619 822 ntBASIC20.82■□□□□ 0.92
RTL9Q8NET4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 AC008267.7-201ENST00000624570 1194 ntBASIC20.82■□□□□ 0.92
RTL9Q8NET4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL9Q8NET4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL9Q8NET4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 MIR346-201ENST00000362234 95 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC069262.1-201ENST00000539058 672 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC108860.2-201ENST00000562760 2183 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AC016027.1-202ENST00000607927 1699 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 LINC00896-202ENST00000609602 2128 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 AJ011932.1-201ENST00000621707 465 ntBASIC20.81■□□□□ 0.92
RTL9Q8NET4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL9Q8NET4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL9Q8NET4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 AP000842.3-202ENST00000569238 1080 ntBASIC20.8■□□□□ 0.92
RTL9Q8NET4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTL9Q8NET4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.8■□□□□ 0.92
RTL9Q8NET4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTL9Q8NET4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RTL9Q8NET4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms