Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 AL023806.1-201ENST00000603994 1649 ntBASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 AC148477.5-201ENST00000625164 1645 ntBASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC17A8Q8NDX2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 CRYGEP-201ENST00000412192 528 ntBASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 LAGE3P1-201ENST00000425356 484 ntBASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AC018845.2-201ENST00000568326 409 ntBASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 AL589182.2-201ENST00000619332 1049 ntBASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC17A8Q8NDX2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 NCF1C-201ENST00000438382 1427 ntBASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC17A8Q8NDX2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC17A8Q8NDX2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms