Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFCAB3Q8N7B9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 PAICSP2-201ENST00000429118 1150 ntBASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC079781.3-201ENST00000449110 356 ntBASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC104819.1-201ENST00000504587 486 ntBASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 DUTP2-201ENST00000519164 463 ntBASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC117500.6-201ENST00000624871 588 ntBASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFCAB3Q8N7B9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DRAXINP1-201ENST00000437611 948 ntBASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 KRT18P65-201ENST00000439811 1286 ntBASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 KRT18P31-201ENST00000506277 1292 ntBASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AC104692.2-201ENST00000603054 253 ntBASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 AL390719.2-201ENST00000606993 987 ntBASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.04■□□□□ 0.32
EFCAB3Q8N7B9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms