Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 PCDHA12-202ENST00000613593 2588 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 AL590787.1-201ENST00000568856 1315 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 AKR1C7P-201ENST00000305623 895 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 SART3-203ENST00000546611 1184 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 AC139887.3-201ENST00000568585 713 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 MTDHP4-201ENST00000600287 670 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 AC046158.3-201ENST00000624947 2558 ntBASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TTC9CQ8N5M4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AC092068.3-201ENST00000587894 2016 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AC105020.1-201ENST00000435356 2205 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 TUBB8P12-201ENST00000308911 1335 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 TUBB7P-202ENST00000428444 1305 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 TUBB8P7-204ENST00000567960 1332 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AP002414.1-201ENST00000391405 1147 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AF238378.1-201ENST00000526806 358 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 IFNL4P1-201ENST00000607083 540 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AL139424.1-201ENST00000607572 797 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 AC012313.10-201ENST00000623509 926 ntBASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TTC9CQ8N5M4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms