Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 AC002056.1-201ENST00000395613 760 ntBASIC17.31■□□□□ 0.36
CHPFQ8IZ52 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SLC25A6P5-201ENST00000435663 894 ntBASIC17.31■□□□□ 0.36
CHPFQ8IZ52 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 AC004449.1-201ENST00000564240 433 ntBASIC17.31■□□□□ 0.36
CHPFQ8IZ52 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 AC093028.1-201ENST00000622998 982 ntBASIC17.31■□□□□ 0.36
CHPFQ8IZ52 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 GNAS-203ENST00000306120 1878 ntBASIC17.31■□□□□ 0.36
CHPFQ8IZ52 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHPFQ8IZ52 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.3■□□□□ 0.36
CHPFQ8IZ52 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 AL645728.2-201ENST00000641974 660 ntBASIC17.3■□□□□ 0.36
CHPFQ8IZ52 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHPFQ8IZ52 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 AC133963.1-201ENST00000504166 1679 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.29■□□□□ 0.36
CHPFQ8IZ52 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.29■□□□□ 0.36
CHPFQ8IZ52 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms