Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 RNF216P1-203ENST00000404404 2427 ntBASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 AL121912.1-201ENST00000603683 238 ntBASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC116Q8IYX3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 AC243591.1-201ENST00000452967 1364 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 AL450487.1-201ENST00000426799 995 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RPS2P1-201ENST00000434010 821 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RNPS1P1-201ENST00000507437 918 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 AC073648.2-201ENST00000510116 352 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 RN7SL510P-201ENST00000581311 263 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 FLJ38576-201ENST00000623820 2459 ntBASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC116Q8IYX3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC116Q8IYX3 AP002414.1-201ENST00000391405 1147 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms