Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKL3Q8IVW4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 PRELID1P1-202ENST00000567272 903 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 TERC-201ENST00000602385 541 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 AC064862.7-201ENST00000604520 867 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 AL139424.1-201ENST00000607572 797 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 AL589182.2-201ENST00000619332 1049 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 AL355877.3-201ENST00000622820 899 ntBASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDKL3Q8IVW4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 TSPY19P-201ENST00000418461 509 ntBASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 TSPY18P-201ENST00000441642 509 ntBASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 AC091304.2-201ENST00000564639 760 ntBASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL3Q8IVW4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CDKL3Q8IVW4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms