Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 FRMD8P1-201ENST00000440433 1524 ntBASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS4Q8IUM7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 KRT18P34-201ENST00000488218 1270 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 RARRES2P9-201ENST00000565168 469 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 MIR4492-201ENST00000581627 80 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 AC018529.1-201ENST00000613063 361 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 AC073592.8-201ENST00000624126 511 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 AC116353.5-201ENST00000638148 1699 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 LINC00895-201ENST00000629028 1637 ntBASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPAS4Q8IUM7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 AC008764.6-201ENST00000595909 2069 ntBASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.08■□□□□ 0.49
NPAS4Q8IUM7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AC004890.2-204ENST00000481968 304 ntBASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AC073389.1-201ENST00000595595 795 ntBASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms