Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14□□□□□ -0.17
VPS13CQ709C8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 AL353732.1-201ENST00000569618 1459 ntBASIC14□□□□□ -0.17
VPS13CQ709C8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 CDC14C-201ENST00000428251 1719 ntBASIC14□□□□□ -0.17
VPS13CQ709C8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14□□□□□ -0.17
VPS13CQ709C8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14□□□□□ -0.17
VPS13CQ709C8 IGHV3-62-201ENST00000520057 340 ntBASIC14□□□□□ -0.17
VPS13CQ709C8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14□□□□□ -0.17
VPS13CQ709C8 BTBD7P1-201ENST00000447253 1453 ntBASIC14□□□□□ -0.17
VPS13CQ709C8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14□□□□□ -0.17
VPS13CQ709C8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS13CQ709C8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 CROCCP2-202ENST00000412962 2773 ntBASIC13.99□□□□□ -0.17
VPS13CQ709C8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 ZNF890P-202ENST00000530367 1156 ntBASIC13.99□□□□□ -0.17
VPS13CQ709C8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VPS13CQ709C8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13CQ709C8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 FAM86MP-201ENST00000340703 885 ntBASIC13.98□□□□□ -0.17
VPS13CQ709C8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13CQ709C8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13CQ709C8 AC067852.2-201ENST00000590513 2313 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms