Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 NUS1P1-201ENST00000446295 882 ntBASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 KRT89P-201ENST00000620027 1478 ntBASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.66■□□□□ 0.74
PDZRN4Q6ZMN7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 AC005915.1-201ENST00000624912 2018 ntBASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 LINC00265-3P-201ENST00000447588 903 ntBASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDZRN4Q6ZMN7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDZRN4Q6ZMN7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 TOB2P1-201ENST00000469761 992 ntBASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 AL163051.1-201ENST00000569214 1512 ntBASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDZRN4Q6ZMN7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms