Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
C11orf88Q6PI97 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 AC060834.1-201ENST00000443027 2032 ntBASIC14.93□□□□□ -0.02
C11orf88Q6PI97 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 MST1L-201ENST00000442552 2185 ntBASIC14.93□□□□□ -0.02
C11orf88Q6PI97 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 AC034232.1-201ENST00000506026 1064 ntBASIC14.93□□□□□ -0.02
C11orf88Q6PI97 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 LINC00304-203ENST00000565008 1864 ntBASIC14.93□□□□□ -0.02
C11orf88Q6PI97 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.93□□□□□ -0.02
C11orf88Q6PI97 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 STARP1-201ENST00000397973 869 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 MIR3180-5-201ENST00000583743 153 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 AC008687.5-201ENST00000593746 558 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 CR769767.2-201ENST00000622735 460 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 AC026691.1-201ENST00000602502 2017 ntBASIC14.92□□□□□ -0.02
C11orf88Q6PI97 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
C11orf88Q6PI97 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms