Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC27A1Q6PCB7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 RNU1-129P-201ENST00000384064 167 ntBASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 METTL21AP1-201ENST00000438852 635 ntBASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 U1.21-201ENST00000580816 167 ntBASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC27A1Q6PCB7 AC108860.2-201ENST00000562760 2183 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 RN7SL589P-201ENST00000481268 310 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 RARRES2P8-201ENST00000566335 367 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 MIR3909-201ENST00000579518 119 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 MIR4492-201ENST00000581627 80 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 AL031055.1-201ENST00000606362 631 ntBASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SLC27A1Q6PCB7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 PMS2P4-201ENST00000412466 1052 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 AC092474.2-201ENST00000424288 719 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE11-202ENST00000450699 704 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE9P-201ENST00000570642 692 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE10P-202ENST00000612005 668 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 SPDYE8P-202ENST00000612377 668 ntBASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC27A1Q6PCB7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC27A1Q6PCB7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms