Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL031432.2-201ENST00000566714 459 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL928711.1-201ENST00000570165 459 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AP002472.1-201ENST00000577490 586 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AC068137.2-201ENST00000605408 478 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL078644.1-201ENST00000609881 752 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 AL645728.2-201ENST00000641974 660 ntBASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H3F3CQ6NXT2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 CEND1P1-201ENST00000451006 455 ntBASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H3F3CQ6NXT2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.71■□□□□ 0.1
H3F3CQ6NXT2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
H3F3CQ6NXT2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.71■□□□□ 0.1
H3F3CQ6NXT2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC116353.5-201ENST00000638148 1699 ntBASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 FAM58CP-201ENST00000435741 640 ntBASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC091812.2-201ENST00000619081 385 ntBASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC092902.6-201ENST00000641783 218 ntBASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 AC093525.9-201ENST00000624961 1746 ntBASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H3F3CQ6NXT2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms