Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.23■□□□□ 0.19
PRAMEF17Q5VTA0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 NFIC-211ENST00000641145 8399 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 FAM58CP-201ENST00000435741 640 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 AL513480.1-201ENST00000451731 511 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 YBX1P5-201ENST00000509441 847 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 AC007064.4-201ENST00000637740 555 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 GNAS-203ENST00000306120 1878 ntBASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF17Q5VTA0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 CEND1P1-201ENST00000451006 455 ntBASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF17Q5VTA0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF17Q5VTA0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF17Q5VTA0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF17Q5VTA0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF17Q5VTA0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.21■□□□□ 0.18
PRAMEF17Q5VTA0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF17Q5VTA0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms