Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SCARNA2-201ENST00000458748 420 ntBASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 MTDHP4-201ENST00000600287 670 ntBASIC17.66■□□□□ 0.42
LRRC38Q5VT99 AF228730.7-201ENST00000641842 219 ntBASIC17.66■□□□□ 0.42
LRRC38Q5VT99 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TNRC18P3-201ENST00000441896 2691 ntBASIC17.65■□□□□ 0.42
LRRC38Q5VT99 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 AC006449.5-201ENST00000610658 2098 ntBASIC17.65■□□□□ 0.42
LRRC38Q5VT99 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC38Q5VT99 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC38Q5VT99 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.64■□□□□ 0.42
LRRC38Q5VT99 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
LRRC38Q5VT99 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.64■□□□□ 0.42
LRRC38Q5VT99 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms