Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC093525.9-201ENST00000624961 1746 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 BNIP3P42-201ENST00000454982 569 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC044860.1-202ENST00000559481 777 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC132938.2-201ENST00000579188 680 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 BNIP3P29-201ENST00000598302 571 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC013467.2-201ENST00000605472 835 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC011447.5-201ENST00000616168 564 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AL591163.1-201ENST00000641757 987 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 BX323043.1-201ENST00000641006 1765 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 AL023806.1-201ENST00000603994 1649 ntBASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VPS13DQ5THJ4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 MIR658-201ENST00000385210 100 ntBASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AC108860.2-201ENST00000562760 2183 ntBASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 MIR4538-201ENST00000581377 78 ntBASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 WASH4P-201ENST00000564273 1246 ntBASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AL391825.1-201ENST00000457671 1364 ntBASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.26□□□□□ -0.61
VPS13DQ5THJ4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 AC098850.1-201ENST00000419919 790 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VPS13DQ5THJ4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms