Protein–RNA interactions for Protein: Q5T2D3

OTUD3, OTU domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3Q5T2D3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 AC005104.2-201ENST00000427818 678 ntBASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 SPDYE13P-201ENST00000445314 798 ntBASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 AC087388.1-201ENST00000571370 1112 ntBASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
OTUD3Q5T2D3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.21■□□□□ 0.18
OTUD3Q5T2D3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.21■□□□□ 0.18
OTUD3Q5T2D3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AL031133.1-201ENST00000406807 723 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AL645929.1-201ENST00000420084 975 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 KRT18P65-201ENST00000439811 1286 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AL139327.4-201ENST00000612362 153 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AC004263.2-201ENST00000617183 678 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 AC092364.2-201ENST00000596710 2692 ntBASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
OTUD3Q5T2D3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 IGHGP-201ENST00000390555 1178 ntBASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 GPR32P1-201ENST00000601788 811 ntBASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 AL513523.2-202ENST00000427283 2040 ntBASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
OTUD3Q5T2D3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms