Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SP6Q3SY56 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SP6Q3SY56 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SP6Q3SY56 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.18□□□□□ -0.14
SP6Q3SY56 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.18□□□□□ -0.14
SP6Q3SY56 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 AC097374.2-201ENST00000618617 1306 ntBASIC14.17□□□□□ -0.14
SP6Q3SY56 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 HLA-F-220ENST00000434407 884 ntBASIC14.17□□□□□ -0.14
SP6Q3SY56 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.17□□□□□ -0.14
SP6Q3SY56 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.17□□□□□ -0.14
SP6Q3SY56 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.17□□□□□ -0.14
SP6Q3SY56 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 AC105917.1-201ENST00000506637 2539 ntBASIC14.17□□□□□ -0.14
SP6Q3SY56 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
SP6Q3SY56 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 AC063926.3-201ENST00000624734 5658 ntBASIC14.17□□□□□ -0.14
SP6Q3SY56 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SP6Q3SY56 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.17□□□□□ -0.14
SP6Q3SY56 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SP6Q3SY56 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.17□□□□□ -0.14
SP6Q3SY56 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SP6Q3SY56 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.16□□□□□ -0.14
SP6Q3SY56 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SP6Q3SY56 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 ZNF444P1-201ENST00000559497 298 ntBASIC14.16□□□□□ -0.14
SP6Q3SY56 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.16□□□□□ -0.14
SP6Q3SY56 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.16□□□□□ -0.14
SP6Q3SY56 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.16□□□□□ -0.14
SP6Q3SY56 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 FLJ16779-201ENST00000612722 7638 ntBASIC14.16□□□□□ -0.14
SP6Q3SY56 AL391256.1-201ENST00000443260 1855 ntBASIC14.16□□□□□ -0.14
SP6Q3SY56 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.16□□□□□ -0.14
SP6Q3SY56 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SP6Q3SY56 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SP6Q3SY56 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 FRMD8P1-201ENST00000440433 1524 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 LINC01568-207ENST00000641790 1380 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 FAM8A6P-201ENST00000407496 1135 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 SPDYE15P-201ENST00000424157 909 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms