Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
ANKRD55Q3KP44 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 AC104640.1-201ENST00000562617 2109 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 COX5BP2-201ENST00000392354 334 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 AP000523.1-201ENST00000398242 1049 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 SLC25A3P1-201ENST00000443844 931 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ANKRD55Q3KP44 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 DBET-201ENST00000630918 3363 ntBASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 MTCL1P1-201ENST00000446207 792 ntBASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 ECEL1P2-202ENST00000465689 757 ntBASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AC019129.2-201ENST00000609837 1235 ntBASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ANKRD55Q3KP44 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ANKRD55Q3KP44 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms