Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC009154.2-201ENST00000621177 724 ntBASIC17.77■□□□□ 0.44
IRX4P78413 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX4P78413 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.77■□□□□ 0.43
IRX4P78413 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.77■□□□□ 0.43
IRX4P78413 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
IRX4P78413 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
IRX4P78413 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX4P78413 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.77■□□□□ 0.43
IRX4P78413 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.77■□□□□ 0.43
IRX4P78413 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
IRX4P78413 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX4P78413 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IRX4P78413 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX4P78413 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.77■□□□□ 0.43
IRX4P78413 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
IRX4P78413 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.76■□□□□ 0.43
IRX4P78413 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX4P78413 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 AP002414.3-201ENST00000589352 1468 ntBASIC17.76■□□□□ 0.43
IRX4P78413 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IRX4P78413 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX4P78413 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
IRX4P78413 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.76■□□□□ 0.43
IRX4P78413 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.76■□□□□ 0.43
IRX4P78413 DNAJB3-202ENST00000449667 1266 ntBASIC17.76■□□□□ 0.43
IRX4P78413 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX4P78413 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.76■□□□□ 0.43
IRX4P78413 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 NKAPP1-205ENST00000585790 367 ntBASIC17.76■□□□□ 0.43
IRX4P78413 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.76■□□□□ 0.43
IRX4P78413 MTDHP4-201ENST00000600287 670 ntBASIC17.76■□□□□ 0.43
IRX4P78413 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX4P78413 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.76■□□□□ 0.43
IRX4P78413 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX4P78413 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IRX4P78413 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 AL138688.1-201ENST00000624851 1594 ntBASIC17.75■□□□□ 0.43
IRX4P78413 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IRX4P78413 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.75■□□□□ 0.43
IRX4P78413 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.75■□□□□ 0.43
IRX4P78413 AC023274.1-201ENST00000418278 595 ntBASIC17.75■□□□□ 0.43
IRX4P78413 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 AL139288.1-201ENST00000623748 933 ntBASIC17.75■□□□□ 0.43
IRX4P78413 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 AC107918.4-202ENST00000641623 219 ntBASIC17.75■□□□□ 0.43
IRX4P78413 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX4P78413 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX4P78413 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
IRX4P78413 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IRX4P78413 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
IRX4P78413 LINC00304-203ENST00000565008 1864 ntBASIC17.74■□□□□ 0.43
IRX4P78413 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX4P78413 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
IRX4P78413 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms