Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 CXCL1P1-201ENST00000502804 216 ntBASIC18.45■□□□□ 0.54
SNRPFP62306 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SNRPFP62306 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNRPFP62306 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRPFP62306 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SNRPFP62306 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 HCG4B-203ENST00000450128 991 ntBASIC18.44■□□□□ 0.54
SNRPFP62306 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 AC087641.1-201ENST00000557561 1021 ntBASIC18.44■□□□□ 0.54
SNRPFP62306 MIR4751-201ENST00000578027 74 ntBASIC18.44■□□□□ 0.54
SNRPFP62306 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRPFP62306 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNRPFP62306 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 IL9RP2-201ENST00000423948 1312 ntBASIC18.44■□□□□ 0.54
SNRPFP62306 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRPFP62306 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SNRPFP62306 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRPFP62306 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRPFP62306 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 AC106820.2-201ENST00000563775 3264 ntBASIC18.43■□□□□ 0.54
SNRPFP62306 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRPFP62306 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNRPFP62306 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRPFP62306 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRPFP62306 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.43■□□□□ 0.54
SNRPFP62306 ACTL9-202ENST00000612068 1252 ntBASIC18.43■□□□□ 0.54
SNRPFP62306 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 SLC22A20-204ENST00000530038 1673 ntBASIC18.43■□□□□ 0.54
SNRPFP62306 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRPFP62306 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRPFP62306 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms