Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
SPCS3P61009 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.92□□□□□ -0.18
SPCS3P61009 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.92□□□□□ -0.18
SPCS3P61009 AC111152.3-201ENST00000569699 673 ntBASIC13.92□□□□□ -0.18
SPCS3P61009 AC005332.3-201ENST00000589904 676 ntBASIC13.92□□□□□ -0.18
SPCS3P61009 AC019129.2-201ENST00000609837 1235 ntBASIC13.92□□□□□ -0.18
SPCS3P61009 AC011558.1-201ENST00000623459 338 ntBASIC13.92□□□□□ -0.18
SPCS3P61009 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.92□□□□□ -0.18
SPCS3P61009 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.91□□□□□ -0.18
SPCS3P61009 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SPCS3P61009 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.91□□□□□ -0.18
SPCS3P61009 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 BX664615.1-201ENST00000443558 458 ntBASIC13.91□□□□□ -0.18
SPCS3P61009 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.91□□□□□ -0.18
SPCS3P61009 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.91□□□□□ -0.18
SPCS3P61009 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 AL390719.2-201ENST00000606993 987 ntBASIC13.91□□□□□ -0.18
SPCS3P61009 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.91□□□□□ -0.18
SPCS3P61009 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 CICP14-201ENST00000629111 2732 ntBASIC13.91□□□□□ -0.18
SPCS3P61009 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.91□□□□□ -0.18
SPCS3P61009 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SPCS3P61009 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPCS3P61009 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPCS3P61009 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
SPCS3P61009 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.9□□□□□ -0.18
SPCS3P61009 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPCS3P61009 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SPCS3P61009 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
SPCS3P61009 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms