Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 AL512638.1-201ENST00000457493 794 ntBASIC16.31■□□□□ 0.2
CLDN6P56747 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 AC097493.3-201ENST00000509725 367 ntBASIC16.31■□□□□ 0.2
CLDN6P56747 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN6P56747 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN6P56747 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN6P56747 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CLDN6P56747 MIR4515-201ENST00000584082 81 ntBASIC16.31■□□□□ 0.2
CLDN6P56747 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN6P56747 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN6P56747 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN6P56747 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN6P56747 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.3■□□□□ 0.2
CLDN6P56747 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 NOC2LP1-202ENST00000452600 2235 ntBASIC16.3■□□□□ 0.2
CLDN6P56747 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN6P56747 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN6P56747 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN6P56747 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN6P56747 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 SERBP1P5-201ENST00000510079 1181 ntBASIC16.3■□□□□ 0.2
CLDN6P56747 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN6P56747 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN6P56747 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN6P56747 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN6P56747 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN6P56747 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CLDN6P56747 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN6P56747 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 AKAP8P1-201ENST00000434743 1349 ntBASIC16.29■□□□□ 0.2
CLDN6P56747 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN6P56747 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 AC092580.3-201ENST00000430932 139 ntBASIC16.29■□□□□ 0.2
CLDN6P56747 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN6P56747 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN6P56747 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN6P56747 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 OR6D1P-202ENST00000641007 5290 ntBASIC16.29■□□□□ 0.2
CLDN6P56747 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN6P56747 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 ABALON-201ENST00000629058 1903 ntBASIC16.29■□□□□ 0.2
CLDN6P56747 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN6P56747 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms