Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 MIR346-201ENST00000362234 95 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 ARSEP1-201ENST00000420443 635 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.09■□□□□ 0.17
KNTC1P50748 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.09■□□□□ 0.17
KNTC1P50748 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.09■□□□□ 0.17
KNTC1P50748 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.09■□□□□ 0.17
KNTC1P50748 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 AC132938.2-201ENST00000579188 680 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 AC005412.3-201ENST00000580309 715 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 AL591163.1-201ENST00000641757 987 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KNTC1P50748 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KNTC1P50748 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.09■□□□□ 0.17
KNTC1P50748 AC106886.1-201ENST00000568660 600 ntBASIC16.09■□□□□ 0.17
KNTC1P50748 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KNTC1P50748 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.09■□□□□ 0.17
KNTC1P50748 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.09■□□□□ 0.17
KNTC1P50748 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
KNTC1P50748 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KNTC1P50748 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KNTC1P50748 AC004408.2-201ENST00000623613 2777 ntBASIC16.08■□□□□ 0.17
KNTC1P50748 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
KNTC1P50748 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.08■□□□□ 0.16
KNTC1P50748 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KNTC1P50748 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 AC098614.1-201ENST00000368528 745 ntBASIC16.08■□□□□ 0.16
KNTC1P50748 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 SPTLC1P1-201ENST00000447199 261 ntBASIC16.08■□□□□ 0.16
KNTC1P50748 API5-211ENST00000534695 560 ntTSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 AL138918.1-201ENST00000568306 659 ntBASIC16.08■□□□□ 0.16
KNTC1P50748 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.08■□□□□ 0.16
KNTC1P50748 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.08■□□□□ 0.16
KNTC1P50748 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KNTC1P50748 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KNTC1P50748 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
KNTC1P50748 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.08■□□□□ 0.16
KNTC1P50748 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
KNTC1P50748 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
KNTC1P50748 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 MIR1909-201ENST00000411312 80 ntBASIC16.07■□□□□ 0.16
KNTC1P50748 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
KNTC1P50748 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 HILS1-202ENST00000545329 423 ntBASIC16.07■□□□□ 0.16
KNTC1P50748 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.07■□□□□ 0.16
KNTC1P50748 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.07■□□□□ 0.16
KNTC1P50748 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KNTC1P50748 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms