Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1EP49674 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 RNU1-129P-201ENST00000384064 167 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1EP49674 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 AC005034.1-201ENST00000426657 489 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.61■□□□□ 0.25
CSNK1EP49674 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 ALG1L8P-201ENST00000533887 760 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.61■□□□□ 0.25
CSNK1EP49674 U1.21-201ENST00000580816 167 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 AC027307.2-201ENST00000591252 911 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 AL031055.1-201ENST00000606362 631 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 AC008267.7-201ENST00000624570 1194 ntBASIC16.61■□□□□ 0.25
CSNK1EP49674 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1EP49674 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1EP49674 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1EP49674 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1EP49674 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1EP49674 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1EP49674 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1EP49674 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CSNK1EP49674 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CSNK1EP49674 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.6■□□□□ 0.25
CSNK1EP49674 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.6■□□□□ 0.25
CSNK1EP49674 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.6■□□□□ 0.25
CSNK1EP49674 AC097493.3-201ENST00000509725 367 ntBASIC16.6■□□□□ 0.25
CSNK1EP49674 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.6■□□□□ 0.25
CSNK1EP49674 AC069120.2-201ENST00000524091 540 ntBASIC16.6■□□□□ 0.25
CSNK1EP49674 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.6■□□□□ 0.25
CSNK1EP49674 AC087641.1-201ENST00000557561 1021 ntBASIC16.6■□□□□ 0.25
CSNK1EP49674 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.6■□□□□ 0.25
CSNK1EP49674 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 AL035252.4-201ENST00000624174 288 ntBASIC16.6■□□□□ 0.25
CSNK1EP49674 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1EP49674 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CSNK1EP49674 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CSNK1EP49674 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 AP000842.3-202ENST00000569238 1080 ntBASIC16.59■□□□□ 0.25
CSNK1EP49674 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1EP49674 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1EP49674 LINC02560-201ENST00000596379 459 ntBASIC16.59■□□□□ 0.25
CSNK1EP49674 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.59■□□□□ 0.25
CSNK1EP49674 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.59■□□□□ 0.25
CSNK1EP49674 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CSNK1EP49674 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms