Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SPDYE21P-201ENST00000413323 827 ntBASIC15.01□□□□□ -0.01
CX3CR1P49238 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.01□□□□□ -0.01
CX3CR1P49238 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.01□□□□□ -0.01
CX3CR1P49238 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.01□□□□□ -0.01
CX3CR1P49238 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 AP000867.4-201ENST00000641616 219 ntBASIC15.01□□□□□ -0.01
CX3CR1P49238 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 FRMD8P1-201ENST00000440433 1524 ntBASIC15.01□□□□□ -0.01
CX3CR1P49238 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PCDHB19P-201ENST00000570871 2371 ntBASIC15□□□□□ -0.01
CX3CR1P49238 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 FLJ38576-201ENST00000623820 2459 ntBASIC15□□□□□ -0.01
CX3CR1P49238 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15□□□□□ -0.01
CX3CR1P49238 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 MIR5100-201ENST00000579544 119 ntBASIC15□□□□□ -0.01
CX3CR1P49238 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15□□□□□ -0.01
CX3CR1P49238 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 AC138894.3-201ENST00000603787 634 ntBASIC15□□□□□ -0.01
CX3CR1P49238 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15□□□□□ -0.01
CX3CR1P49238 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15□□□□□ -0.01
CX3CR1P49238 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15□□□□□ -0.01
CX3CR1P49238 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CX3CR1P49238 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.99□□□□□ -0.01
CX3CR1P49238 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.99□□□□□ -0.01
CX3CR1P49238 ABCD1P5-201ENST00000445663 754 ntBASIC14.99□□□□□ -0.01
CX3CR1P49238 NUS1P1-201ENST00000446295 882 ntBASIC14.99□□□□□ -0.01
CX3CR1P49238 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.99□□□□□ -0.01
CX3CR1P49238 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CX3CR1P49238 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CX3CR1P49238 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms