Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC1A3P43003 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC1A3P43003 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A3P43003 AC097637.2-201ENST00000624096 1997 ntBASIC15.69■□□□□ 0.1
SLC1A3P43003 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A3P43003 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A3P43003 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A3P43003 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A3P43003 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC1A3P43003 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A3P43003 AC124947.2-201ENST00000547118 1133 ntBASIC15.69■□□□□ 0.1
SLC1A3P43003 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 AL139288.1-201ENST00000623748 933 ntBASIC15.69■□□□□ 0.1
SLC1A3P43003 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A3P43003 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 GPR89P-201ENST00000407924 1495 ntBASIC15.69■□□□□ 0.1
SLC1A3P43003 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A3P43003 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A3P43003 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A3P43003 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC1A3P43003 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A3P43003 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A3P43003 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A3P43003 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC1A3P43003 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A3P43003 MTDHP3-201ENST00000594186 672 ntBASIC15.68■□□□□ 0.1
SLC1A3P43003 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 AC092053.1-201ENST00000605787 1936 ntBASIC15.68■□□□□ 0.1
SLC1A3P43003 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A3P43003 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A3P43003 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 AC004817.3-201ENST00000602957 2129 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A3P43003 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 AC008894.3-201ENST00000624324 3103 ntBASIC15.67■□□□□ 0.1
SLC1A3P43003 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC1A3P43003 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A3P43003 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A3P43003 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC1A3P43003 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms