Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TNFSF9P41273 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFSF9P41273 KRT18P13-201ENST00000400056 1290 ntBASIC18.36■□□□□ 0.53
TNFSF9P41273 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFSF9P41273 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFSF9P41273 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFSF9P41273 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.36■□□□□ 0.53
TNFSF9P41273 MCCD1P2-201ENST00000423228 335 ntBASIC18.36■□□□□ 0.53
TNFSF9P41273 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFSF9P41273 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFSF9P41273 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.36■□□□□ 0.53
TNFSF9P41273 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.36■□□□□ 0.53
TNFSF9P41273 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 AL121761.2-201ENST00000598007 1648 ntBASIC18.36■□□□□ 0.53
TNFSF9P41273 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 AL021920.2-201ENST00000624828 1351 ntBASIC18.36■□□□□ 0.53
TNFSF9P41273 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFSF9P41273 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFSF9P41273 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TNFSF9P41273 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TNFSF9P41273 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.35■□□□□ 0.53
TNFSF9P41273 RPSAP43-201ENST00000402237 625 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.35■□□□□ 0.53
TNFSF9P41273 AC074386.1-202ENST00000463561 864 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 ALG1L5P-201ENST00000482043 771 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
TNFSF9P41273 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFSF9P41273 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 MPDU1-223ENST00000582151 728 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.35■□□□□ 0.53
TNFSF9P41273 AC022211.2-201ENST00000585075 2527 ntBASIC18.35■□□□□ 0.53
TNFSF9P41273 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TNFSF9P41273 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TNFSF9P41273 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TNFSF9P41273 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TNFSF9P41273 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFSF9P41273 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.34■□□□□ 0.53
TNFSF9P41273 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNFSF9P41273 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 AL353732.1-201ENST00000569618 1459 ntBASIC18.34■□□□□ 0.53
TNFSF9P41273 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 AC005915.1-201ENST00000624912 2018 ntBASIC18.34■□□□□ 0.53
TNFSF9P41273 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFSF9P41273 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.34■□□□□ 0.53
TNFSF9P41273 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.34■□□□□ 0.53
TNFSF9P41273 AC112482.1-201ENST00000492080 688 ntBASIC18.34■□□□□ 0.53
TNFSF9P41273 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.34■□□□□ 0.53
TNFSF9P41273 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.34■□□□□ 0.53
TNFSF9P41273 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFSF9P41273 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFSF9P41273 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFSF9P41273 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNFSF9P41273 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TNFSF9P41273 AC090340.1-201ENST00000620778 4980 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms