Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.89□□□□□ -0.03
GDNFP39905 AC083849.1-201ENST00000615227 514 ntBASIC14.89□□□□□ -0.03
GDNFP39905 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.89□□□□□ -0.03
GDNFP39905 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 AL365203.3-201ENST00000609742 2057 ntBASIC14.89□□□□□ -0.03
GDNFP39905 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDNFP39905 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GDNFP39905 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GDNFP39905 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
GDNFP39905 FAM210CP-201ENST00000445714 574 ntBASIC14.88□□□□□ -0.03
GDNFP39905 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
GDNFP39905 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 AC023824.1-201ENST00000562945 2975 ntBASIC14.88□□□□□ -0.03
GDNFP39905 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GDNFP39905 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GDNFP39905 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
GDNFP39905 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.87□□□□□ -0.03
GDNFP39905 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.87□□□□□ -0.03
GDNFP39905 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GDNFP39905 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.87□□□□□ -0.03
GDNFP39905 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.87□□□□□ -0.03
GDNFP39905 AC124947.2-201ENST00000547118 1133 ntBASIC14.87□□□□□ -0.03
GDNFP39905 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.87□□□□□ -0.03
GDNFP39905 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.87□□□□□ -0.03
GDNFP39905 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
GDNFP39905 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.87□□□□□ -0.03
GDNFP39905 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.87□□□□□ -0.03
GDNFP39905 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms