Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCLP35914 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HMGCLP35914 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMGCLP35914 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 CRYGEP-201ENST00000412192 528 ntBASIC16.92■□□□□ 0.3
HMGCLP35914 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCLP35914 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCLP35914 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCLP35914 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCLP35914 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.92■□□□□ 0.3
HMGCLP35914 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGCLP35914 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGCLP35914 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGCLP35914 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCLP35914 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.92■□□□□ 0.3
HMGCLP35914 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGCLP35914 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCLP35914 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCLP35914 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCLP35914 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 AC106886.4-201ENST00000623557 2502 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.91■□□□□ 0.3
HMGCLP35914 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 FAM185BP-201ENST00000443595 716 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.91■□□□□ 0.3
HMGCLP35914 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCLP35914 AC106730.1-201ENST00000566722 1090 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 AC091167.2-201ENST00000579581 588 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMGCLP35914 LINC00895-201ENST00000629028 1637 ntBASIC16.91■□□□□ 0.3
HMGCLP35914 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCLP35914 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HMGCLP35914 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCLP35914 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCLP35914 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
HMGCLP35914 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 ZNF259P1-201ENST00000407656 1365 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMGCLP35914 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCLP35914 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCLP35914 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCLP35914 HCG4B-203ENST00000450128 991 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 SLC25A1P1-201ENST00000528351 927 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 AC005412.3-201ENST00000580309 715 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCLP35914 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 AC013467.2-201ENST00000605472 835 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCLP35914 PCDHA12-202ENST00000613593 2588 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 AL353732.1-201ENST00000569618 1459 ntBASIC16.9■□□□□ 0.3
HMGCLP35914 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCLP35914 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCLP35914 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms