Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CIITAP33076 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CIITAP33076 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CIITAP33076 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CIITAP33076 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.1■□□□□ 0.65
CIITAP33076 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CIITAP33076 DNAJB3-201ENST00000446806 729 ntBASIC19.1■□□□□ 0.65
CIITAP33076 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CIITAP33076 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.1■□□□□ 0.65
CIITAP33076 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.1■□□□□ 0.65
CIITAP33076 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.1■□□□□ 0.65
CIITAP33076 AC087641.1-201ENST00000557561 1021 ntBASIC19.1■□□□□ 0.65
CIITAP33076 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CIITAP33076 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CIITAP33076 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CIITAP33076 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.09■□□□□ 0.65
CIITAP33076 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CIITAP33076 RPSAP43-201ENST00000402237 625 ntBASIC19.09■□□□□ 0.65
CIITAP33076 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.09■□□□□ 0.65
CIITAP33076 GPX1P2-201ENST00000429271 606 ntBASIC19.09■□□□□ 0.65
CIITAP33076 AC140658.5-201ENST00000438532 169 ntBASIC19.09■□□□□ 0.65
CIITAP33076 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.09■□□□□ 0.65
CIITAP33076 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.09■□□□□ 0.65
CIITAP33076 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.09■□□□□ 0.65
CIITAP33076 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 AP002472.1-201ENST00000577490 586 ntBASIC19.09■□□□□ 0.65
CIITAP33076 AC068137.2-201ENST00000605408 478 ntBASIC19.09■□□□□ 0.65
CIITAP33076 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.09■□□□□ 0.65
CIITAP33076 C20orf181-201ENST00000623918 480 ntBASIC19.09■□□□□ 0.65
CIITAP33076 AC006277.1-201ENST00000624348 1610 ntBASIC19.09■□□□□ 0.65
CIITAP33076 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CIITAP33076 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CIITAP33076 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CIITAP33076 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.09■□□□□ 0.65
CIITAP33076 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CIITAP33076 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.08■□□□□ 0.65
CIITAP33076 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CIITAP33076 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.08■□□□□ 0.65
CIITAP33076 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.08■□□□□ 0.65
CIITAP33076 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CIITAP33076 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CIITAP33076 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 UPF3AP3-201ENST00000420996 769 ntBASIC19.08■□□□□ 0.64
CIITAP33076 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.08■□□□□ 0.64
CIITAP33076 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CIITAP33076 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.08■□□□□ 0.64
CIITAP33076 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.08■□□□□ 0.64
CIITAP33076 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.08■□□□□ 0.64
CIITAP33076 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.08■□□□□ 0.64
CIITAP33076 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CIITAP33076 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 AC092919.2-201ENST00000623631 1645 ntBASIC19.07■□□□□ 0.64
CIITAP33076 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CIITAP33076 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CIITAP33076 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CIITAP33076 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.07■□□□□ 0.64
CIITAP33076 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CIITAP33076 KRT18P13-201ENST00000400056 1290 ntBASIC19.07■□□□□ 0.64
CIITAP33076 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.07■□□□□ 0.64
CIITAP33076 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms