Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23.69■■□□□ 1.38
CPS1P31327 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.69■■□□□ 1.38
CPS1P31327 AL139099.5-201ENST00000635274 300 ntBASIC23.69■■□□□ 1.38
CPS1P31327 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPS1P31327 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.68■■□□□ 1.38
CPS1P31327 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CPS1P31327 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CPS1P31327 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
CPS1P31327 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
CPS1P31327 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
CPS1P31327 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC23.68■■□□□ 1.38
CPS1P31327 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.68■■□□□ 1.38
CPS1P31327 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.68■■□□□ 1.38
CPS1P31327 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC23.68■■□□□ 1.38
CPS1P31327 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CPS1P31327 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.68■■□□□ 1.38
CPS1P31327 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.68■■□□□ 1.38
CPS1P31327 TUBB1P2-201ENST00000422712 1306 ntBASIC23.68■■□□□ 1.38
CPS1P31327 TUBB1P1-201ENST00000503144 1300 ntBASIC23.68■■□□□ 1.38
CPS1P31327 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC23.68■■□□□ 1.38
CPS1P31327 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPS1P31327 AC133963.1-201ENST00000504166 1679 ntBASIC23.67■■□□□ 1.38
CPS1P31327 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC23.67■■□□□ 1.38
CPS1P31327 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CPS1P31327 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.67■■□□□ 1.38
CPS1P31327 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC23.67■■□□□ 1.38
CPS1P31327 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CPS1P31327 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC23.67■■□□□ 1.38
CPS1P31327 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC23.67■■□□□ 1.38
CPS1P31327 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPS1P31327 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 AC004408.2-201ENST00000623613 2777 ntBASIC23.66■■□□□ 1.38
CPS1P31327 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
CPS1P31327 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
CPS1P31327 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 ELK1P1-201ENST00000485699 580 ntBASIC23.66■■□□□ 1.38
CPS1P31327 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC23.66■■□□□ 1.38
CPS1P31327 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CPS1P31327 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC23.66■■□□□ 1.38
CPS1P31327 RN7SL190P-201ENST00000582519 257 ntBASIC23.66■■□□□ 1.38
CPS1P31327 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC23.66■■□□□ 1.38
CPS1P31327 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPS1P31327 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPS1P31327 TOP3BP1-201ENST00000420768 1380 ntBASIC23.65■■□□□ 1.38
CPS1P31327 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.65■■□□□ 1.38
CPS1P31327 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.65■■□□□ 1.38
CPS1P31327 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC23.65■■□□□ 1.38
CPS1P31327 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.65■■□□□ 1.38
CPS1P31327 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC23.65■■□□□ 1.38
CPS1P31327 AC015936.2-201ENST00000593177 259 ntBASIC23.65■■□□□ 1.38
CPS1P31327 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPS1P31327 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CPS1P31327 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.65■■□□□ 1.38
CPS1P31327 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPS1P31327 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC23.65■■□□□ 1.38
CPS1P31327 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPS1P31327 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC23.64■■□□□ 1.38
CPS1P31327 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPS1P31327 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPS1P31327 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.64■■□□□ 1.38
CPS1P31327 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPS1P31327 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC23.64■■□□□ 1.38
CPS1P31327 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23.64■■□□□ 1.38
CPS1P31327 MTND6P24-201ENST00000440466 518 ntBASIC23.64■■□□□ 1.38
CPS1P31327 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.64■■□□□ 1.38
CPS1P31327 CROCCP4-201ENST00000457096 498 ntBASIC23.64■■□□□ 1.38
CPS1P31327 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC23.64■■□□□ 1.38
CPS1P31327 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms