Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CTGFP29279 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.93■□□□□ 0.62
CTGFP29279 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTGFP29279 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CTGFP29279 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.93■□□□□ 0.62
CTGFP29279 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.93■□□□□ 0.62
CTGFP29279 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
CTGFP29279 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.93■□□□□ 0.62
CTGFP29279 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTGFP29279 SLC7A15P-201ENST00000424028 1363 ntBASIC18.93■□□□□ 0.62
CTGFP29279 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.92■□□□□ 0.62
CTGFP29279 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CTGFP29279 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.92■□□□□ 0.62
CTGFP29279 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.92■□□□□ 0.62
CTGFP29279 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.92■□□□□ 0.62
CTGFP29279 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CTGFP29279 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTGFP29279 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 AC093004.1-201ENST00000508850 424 ntBASIC18.92■□□□□ 0.62
CTGFP29279 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.92■□□□□ 0.62
CTGFP29279 CTBP2P3-201ENST00000585629 1255 ntBASIC18.92■□□□□ 0.62
CTGFP29279 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.92■□□□□ 0.62
CTGFP29279 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.92■□□□□ 0.62
CTGFP29279 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.92■□□□□ 0.62
CTGFP29279 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTGFP29279 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 AC098818.2-201ENST00000564925 2320 ntBASIC18.91■□□□□ 0.62
CTGFP29279 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 AC009113.1-201ENST00000570267 2443 ntBASIC18.91■□□□□ 0.62
CTGFP29279 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.91■□□□□ 0.62
CTGFP29279 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.91■□□□□ 0.62
CTGFP29279 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTGFP29279 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
CTGFP29279 KRT8P49-201ENST00000604166 1432 ntBASIC18.91■□□□□ 0.62
CTGFP29279 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTGFP29279 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.9■□□□□ 0.62
CTGFP29279 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTGFP29279 FAM86MP-201ENST00000340703 885 ntBASIC18.9■□□□□ 0.62
CTGFP29279 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.9■□□□□ 0.62
CTGFP29279 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTGFP29279 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.9■□□□□ 0.62
CTGFP29279 TTTY23B-201ENST00000442790 549 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms