Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL662890.1-201ENST00000396818 632 ntBASIC21.94■■□□□ 1.1
RXRBP28702 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RXRBP28702 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 TDH-203ENST00000531764 1110 ntBASIC21.94■■□□□ 1.1
RXRBP28702 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.94■■□□□ 1.1
RXRBP28702 TOP3BP1-201ENST00000420768 1380 ntBASIC21.94■■□□□ 1.1
RXRBP28702 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.94■■□□□ 1.1
RXRBP28702 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RXRBP28702 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.94■■□□□ 1.1
RXRBP28702 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RXRBP28702 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 EIF4HP1-201ENST00000453115 687 ntBASIC21.93■■□□□ 1.1
RXRBP28702 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 KRT8P12-202ENST00000472924 1397 ntBASIC21.93■■□□□ 1.1
RXRBP28702 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.93■■□□□ 1.1
RXRBP28702 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.93■■□□□ 1.1
RXRBP28702 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RXRBP28702 LINC00895-201ENST00000629028 1637 ntBASIC21.93■■□□□ 1.1
RXRBP28702 AC244452.3-201ENST00000636814 210 ntBASIC21.93■■□□□ 1.1
RXRBP28702 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.93■■□□□ 1.1
RXRBP28702 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.92■■□□□ 1.1
RXRBP28702 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RXRBP28702 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.92■■□□□ 1.1
RXRBP28702 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.92■■□□□ 1.1
RXRBP28702 KRT8P22-201ENST00000562317 1415 ntBASIC21.92■■□□□ 1.1
RXRBP28702 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.92■■□□□ 1.1
RXRBP28702 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.92■■□□□ 1.1
RXRBP28702 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.92■■□□□ 1.1
RXRBP28702 AC092337.1-201ENST00000568699 1129 ntBASIC21.92■■□□□ 1.1
RXRBP28702 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.92■■□□□ 1.1
RXRBP28702 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 AL139327.4-201ENST00000612362 153 ntBASIC21.92■■□□□ 1.1
RXRBP28702 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.92■■□□□ 1.1
RXRBP28702 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.92■■□□□ 1.1
RXRBP28702 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RXRBP28702 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RXRBP28702 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21.91■■□□□ 1.1
RXRBP28702 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RXRBP28702 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.91■■□□□ 1.1
RXRBP28702 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.91■■□□□ 1.1
RXRBP28702 AKR7A2P1-201ENST00000460134 915 ntBASIC21.91■■□□□ 1.1
RXRBP28702 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.91■■□□□ 1.1
RXRBP28702 TMEM198B-204ENST00000484016 896 ntBASIC21.91■■□□□ 1.1
RXRBP28702 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.91■■□□□ 1.1
RXRBP28702 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.91■■□□□ 1.1
RXRBP28702 RARRES2P5-201ENST00000564013 466 ntBASIC21.91■■□□□ 1.1
RXRBP28702 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.91■■□□□ 1.1
RXRBP28702 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms