Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
GDF1P27539 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GDF1P27539 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GDF1P27539 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 AC074386.1-202ENST00000463561 864 ntBASIC15.41■□□□□ 0.06
GDF1P27539 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.41■□□□□ 0.06
GDF1P27539 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.41■□□□□ 0.06
GDF1P27539 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
GDF1P27539 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 AC005829.1-201ENST00000570002 483 ntBASIC15.41■□□□□ 0.06
GDF1P27539 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.41■□□□□ 0.06
GDF1P27539 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.41■□□□□ 0.06
GDF1P27539 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GDF1P27539 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.41■□□□□ 0.06
GDF1P27539 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDF1P27539 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
GDF1P27539 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
GDF1P27539 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.4■□□□□ 0.06
GDF1P27539 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
GDF1P27539 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.4■□□□□ 0.06
GDF1P27539 ALG1L5P-201ENST00000482043 771 ntBASIC15.4■□□□□ 0.06
GDF1P27539 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.4■□□□□ 0.06
GDF1P27539 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.4■□□□□ 0.06
GDF1P27539 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 AC068137.2-201ENST00000605408 478 ntBASIC15.4■□□□□ 0.06
GDF1P27539 C20orf181-201ENST00000623918 480 ntBASIC15.4■□□□□ 0.06
GDF1P27539 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.4■□□□□ 0.06
GDF1P27539 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.4■□□□□ 0.06
GDF1P27539 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDF1P27539 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms