Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CCND1P24385 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.2■□□□□ 0.34
CCND1P24385 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.2■□□□□ 0.34
CCND1P24385 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.2■□□□□ 0.34
CCND1P24385 Z69720.1-201ENST00000601483 472 ntBASIC17.2■□□□□ 0.34
CCND1P24385 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 LINC01451-201ENST00000623792 534 ntBASIC17.2■□□□□ 0.34
CCND1P24385 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.2■□□□□ 0.34
CCND1P24385 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 AC099063.4-201ENST00000641099 1602 ntBASIC17.2■□□□□ 0.34
CCND1P24385 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.2■□□□□ 0.34
CCND1P24385 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCND1P24385 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCND1P24385 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCND1P24385 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.19■□□□□ 0.34
CCND1P24385 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.19■□□□□ 0.34
CCND1P24385 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.19■□□□□ 0.34
CCND1P24385 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.19■□□□□ 0.34
CCND1P24385 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCND1P24385 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCND1P24385 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCND1P24385 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCND1P24385 PAUPAR-201ENST00000630360 2965 ntBASIC17.19■□□□□ 0.34
CCND1P24385 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCND1P24385 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCND1P24385 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 AL845331.1-201ENST00000424978 1190 ntBASIC17.18■□□□□ 0.34
CCND1P24385 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCND1P24385 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.18■□□□□ 0.34
CCND1P24385 AP002414.4-201ENST00000589764 1148 ntBASIC17.18■□□□□ 0.34
CCND1P24385 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCND1P24385 AL138831.2-201ENST00000606564 490 ntBASIC17.18■□□□□ 0.34
CCND1P24385 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms